PAMP-tracheo: Vascular plants in the research project on dark diversity of plant communities in the centre-east of Navarra (Spain)

出現紀錄
最新版本 published by University of Navarra – Department of Environmental Biology on 1月 17, 2022 University of Navarra – Department of Environmental Biology
發布日期:
2022年1月17日
授權條款:
CC-BY 4.0

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說明

This dataset provides information about 1517 preserved specimens from 491 species and subspecies and 72 families of vascular plants. The specimens were collected from 2019 to 2021 in 96 plots located in the centre-east of Navarra (northern Spain).

資料紀錄

此資源出現紀錄的資料已發佈為達爾文核心集檔案（DwC-A），其以一或多組資料表構成分享生物多樣性資料的標準格式。 核心資料表包含 1,517 筆紀錄。

此 IPT 存放資料以提供資料儲存庫服務。資料與資源的詮釋資料可由「下載」單元下載。「版本」表格列出此資源的其它公開版本，以便利追蹤其隨時間的變更。

版本

以下的表格只顯示可公開存取資源的已發布版本。

如何引用

研究者應依照以下指示引用此資源。:

Ibáñez R, Valerio M, Imas M (2022): PAMP-tracheo: Vascular plants in the research project on dark diversity of plant communities in the centre-east of Navarra (Spain). v1.0. University of Navarra – Department of Environmental Biology. Dataset/Occurrence. https://doi.org/10.15470/pxktos

權利

研究者應尊重以下權利聲明。:

此資料的發布者及權利單位為 University of Navarra – Department of Environmental Biology。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF 註冊

此資源已向GBIF註冊，並指定以下之GBIF UUID: bd3933fb-607e-491b-9009-9c08d608d04b。  University of Navarra – Department of Environmental Biology 發佈此資源，並經由GBIF Spain同意向GBIF註冊成為資料發佈者。

關鍵字

Occurrence; Specimen; dark diversity; flora; herbarium; Navarra; northern Spain; permanent plots; vascular plants

聯絡資訊

Ricardo Ibáñez
  • 元數據提供者 ●
  • 出處 ●
  • 連絡人
  • Associate Professor
University of Navarra
  • C/ Irunlarrea 1
E-31008 Pamplona
Navarra
ES
  • +34948425600
Mercedes Valerio
  • 出處
  • Researcher
University of Navarra
  • C/ Irunlarrea 1
E-31008 Pamplona
Navarra
ES
  • +34948425600
María Imas
  • 元數據提供者 ●
  • 出處
  • Technician
University of Navarra
  • C/ Irunlarrea 1
E-31008 Pamplona
Navarra
ES
  • +34948425600

地理涵蓋範圍

Specimens were collected in the centre-east of Navarra (northern Spain). The site studied covers an area of 314 km2, defined by a circle of 10 km radius.

界定座標範圍 緯度南界 經度西界 [42.619, -1.325], 緯度北界 經度東界 [42.795, -1.097]

分類群涵蓋範圍

Out of a total of 1517 specimens, all were identified to species or subspecies level. They belong to 491 species or subspecies and 72 families of vascular plants.

Phylum Tracheophyta (vascular plants)
Class Equisetopsida (horsetails), Liliopsida (monocots), Magnoliopsida (dicotyledons), Pinopsida (conifers), Polypodiopsida (modern ferns)

時間涵蓋範圍

起始日期 / 結束日期 2019-05-20 / 2021-06-11

計畫資料

The dark diversity of plant communities was explored in the centre-east of the Navarra region (northern Spain). An inventory was conducted based on fieldwork and taxa were identified. The complete dataset was contributed to the DarkDivNet research network which aims to explore the dark diversity of plant communities at a global scale (https://macroecology.ut.ee/en/darkdivnet/).

計畫名稱 Exploring the dark diversity of plant communities in the centre-east of Navarra (Spain)
辨識碼 -
經費來源 This research was funded by University of Navarra (project “Red de Observatorios de la Biodiversidad de Navarra (ROBIN)”). Mercedes Valerio was supported by a predoctoral grant of Departamento de Educación, Gobierno de Navarra (“Ayudas predoctorales para la realización de programas de doctorado de interés para Navarra; Plan de Formación y de I+D 2018”).
研究區域描述 The area studied is located in the centre-east Navarra (northern Spain) and is centred in the municipality of Romanzado. Altitude ranges from 441 to 1228 m.a.s.l. The bedrock is mainly composed of limestones, marls, flysch, sandstones and clays (Cenozoic). Climate is Mediterranean, characterized by dry summers and cold winters. Mean annual temperature ranges from 9.4 to 19.9ºC, and mean annual precipitation ranges from 695 to 886 mm. The site is located in the boundary between the Eurosiberian and Mediterranean biogeographic regions and vegetation is dominated by evergreen oak forest (Quercus rotundifolia), downy oak forest (Q. pubescens) and European beech forest (Fagus sylvatica). Traditional management consisted in extensive sheep and cattle grazing although grazing cessation is general throughout the region.
研究設計描述 In 2019 and 2020, 90 co-occurrence plots of 10 x 10 m were studied, as well as 6 permanent plots of the same size. Co-occurrence plots were randomly selected from an area of 10 km radius around the centre of the study area (defined as the midpoint of the permanent sites), including relatively undisturbed natural or semi-natural vegetation of any kind, with plots located in different habitats. Permanent plots were selected in three habitat types relatively frequent in the study area. Each of these three typical target habitats were sampled by pairs of permanent sites (localities) each one under different anthropogenic disturbance conditions (relatively natural vs. disturbed). Species cover was estimated in each plot for all vascular plants present. Plots were studied in spring season.

參與計畫的人員:

Ricardo Ibáñez
  • 研究主持人
Mercedes Valerio
  • 研究主持人
María Imas
  • 處理者

取樣方法

All vascular plants present in each plot were identified. Plant specimens were collected for appropriate identification and voucher.

研究範圍 The specimens were collected in an area of 314 km2, defined by a circle of 10 km radius, centred in the municipality of Romanzado (centre-east Navarra, Spain). Samples were collected between the years 2019 and 2021, on a yearly basis.

方法步驟描述:

  1. Plant collection. Plant vouchers were selected and collected in the field.
  2. Identification to species or subspecies level. Identification was performed between 2019 and 2021 by R. Ibáñez according to Flora iberica (Castroviejo 1986-2021).
  3. Plant conservation. Specimens were dried and pressed for conservation using standard protocols. Vouchers were deposited in the herbarium of the University of Navarra (PAMP).
  4. Numbering and digitization of vouchers. From 2019 to date, each specimen was labelled, with a unique collection number, and digitized, using Elysia software (v2.0 Pando et al.).
  5. Species identification. Identification of herbarium specimens was done using Flora iberica (Castroviejo 1986-2021).
  6. Names of municipalities, localities and place names were standardized according to Toponimia Oficial de Navarra (http://toponimianavarra.tracasa.es/).
  7. Georeferencing. Localities were georeferenced using geographic coordinates. Datum and uncertainty were also assigned.
  8. Internet exportation. Data were exported from the Elysia database under a Darwin Core format (Wieczorek et al. 2012).
  9. Data checking and validation. Coordinates, characters and format of dates were checked for possible mistakes using Darwin test software (v3.4 Pando et al.). This software allowed validating data in the Darwin Core format.
  10. Metadata were documented and the dataset was published in the GBIF data portal using the Integrated Publishing Toolkit (IPT v2.5.2) of GBIF.es (http://ipt.gbif.es/).

收藏資料

蒐藏名稱 PAMP-tracheo: Plantas vasculares del proyecto de investigación sobre diversidad oculta de comunidades vegetales en el centro-este de Navarra (España)
蒐藏編號 PAMP: TRACHEO_DarkDivNet_D145_RIMV
上層採集品識別碼 PAMP: TRACHEO
標本保存方法 Dried and pressed
管理單位 計數 1,517 +/- 1 sheets

引用文獻

  1. Castroviejo S (coord.) (1986-2021): Flora iberica. Vols. 1-21. Real Jardín Botánico, CSIC. Madrid. URI: http://hdl.handle.net/10261/131558
  2. Pando F., Lujano M., Cezón K. Darwin Test (3.4): una aplicación para la validación y chequeo de los datos en formato Darwin Core (consulta: 17/12/2021). GBIF.ES. Real Jardín Botánico (CSIC). Ministerio de Ciencia e Innovación. URI: https://www.gbif.es/software/darwin-test/
  3. Pando F, Lujano M, Cezón K: Elysia (2.0): una aplicación para la gestión completa de colecciones biológicas (consulta: 30/11/2021). GBIF.ES - CSIC. Ministerio de Ciencia e Innovación. URI: https://www.gbif.es/software/elysia/
  4. Wieczorek J, Bloom D, Guralnick R, Blum S, Döring M, Giovanni R, Robertson T, Vieglais D (2012): Darwin Core: An evolving community-developed biodiversity data standard. PLoS ONE 7(1): e29715. https://doi.org/10.1371/journal.pone.0029715

額外的詮釋資料

The origin of the PAMP Herbarium dates back to the arrival at the University of Navarra by Professor T.M. Losa España in 1964. One year later M.L. López Fernández began her doctoral thesis, maintaining her contributions to the herbarium uninterruptedly for several decades. Most of the material deposited in the herbarium comes from collections made by researchers from the Department of Environmental Biology (formerly Department of Botany) of the University of Navarra, as a result of theses and dissertations generally carried out in the territory of the Autonomous Community of Navarra (Spain). The herbarium store c. 100 000 sheets with dried specimens. The digitisation of the specimens is done through the Elysia v2.0 software (Pando et al.) and was partially supported by the Spanish Government (CGL2007-30978-E, CGL2009-08507-E and CGL2011-15056-E).

替代的識別碼 10.15470/pxktos
https://ipt.gbif.es/resource?r=pamp-tracheo-ddn145-rimv