Description
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 1 263 enregistrements.
1 tableurs de données d'extension existent également. Un enregistrement d'extension fournit des informations supplémentaires sur un enregistrement du cœur de standard (core). Le nombre d'enregistrements dans chaque tableur de données d'extension est illustré ci-dessous.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
MZNA (2024). Literature records in MZNA-LIT: primary biodiversity records in environmental assessments in Spain. v1.2. University of Navarra, Museum of Zoology. Occurrence dataset. https://doi.org/10.15470/bvznpy
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est University of Navarra – Department of Environmental Biology. Ce travail est sous licence Creative Commons Attribution (CC-BY) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : 3d6fbb6d-8699-4f93-9adc-c1fd6bc03f4e. University of Navarra – Department of Environmental Biology publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du GBIF Spain.
Mots-clé
Occurrence; Observation; Environmental Assessment; Protected species; Public archives; Dark Data
Contacts
- Fournisseur Des Métadonnées ●
- Créateur ●
- Personne De Contact
- PhD student
https://orcid.org/0009-0004-1833-9720
- Créateur
- Institution
- Conservateur
- Auteur
- Curateur Des Données
- Conservateur
- Conservateur
- Conservateur
Couverture géographique
The data set primarily comprises occurrence records from Peninsular Spain (99.84%). It also includes two other records from the Balearic and Canary Islands.
| Enveloppe géographique | Sud Ouest [28,951, -13,61], Nord Est [43,659, 2,729] |
|---|
Couverture taxonomique
The data set comprises records of 59 species corresponding to five classes, 16 orders, and 23 families. The species correspond to 31 non-Chiroptera threatened species listed in the Spanish Catalogue of Threatened Species (11 endangered and 20 vulnerable) and 28 Chiroptera species (one endangered, 11 vulnerable, and 16 listed in the List of Wild Species under Special Protection Regime).
| Species | Aegypius monachus (Buitre negro), Aphanius iberus (Fartet), Aquila adalberti (Águila imperial ibérica), Aquila fasciata (Águila perdicera), Ardeola ralloides (Garcilla cangrejera), Aythya nyroca (Porrón pardo), Barbastella barbastellus (Murciélago de bosque), Botaurus stellaris (Avetoro común), Charadrius alexandrinus (Chorlitejo patinegro), Charadrius morinellus (Chorlito carambolo), Chersophilus duponti (Alondra de Dupont o Ricotí), Chioglossa lusitanica (Salamandra rabilarga), Ciconia nigra (Cigüeña negra), Circus pygargus (Aguilucho cenizo), Emys orbicularis (Galápago europeo), Eptesicus isabellinus (Murciélago hortelano mediterráneo), Eptesicus serotinus (Murciélago hortelano), Erythropygia galactotes (Alzacola), Fulica cristata (Focha moruna), Gypaetus barbatus (Quebrantahuesos), Hypsugo savii (Murciélago montañero), Larus audouinii (Gaviota de Audouin), Marmaronetta angustirostris (Cerceta pardilla), Microtus cabrerae (Topillo de Cabrera), Milvus milvus (Milano real), Miniopterus schreibersii (Murciélago de cueva), Myotis alcathoe (Murciélago ratonero bigotudo pequeño), Myotis bechsteinii (Murciélago ratonero forestal), Myotis blythii (Murciélago ratonero mediano), Myotis capaccinii (Murciélago ratonero patudo), Myotis daubentonii (Murciélago ratonero ribereño), Myotis emarginatus (Murciélago ratonero pardo), Myotis myotis (Murciélago ratonero grande), Myotis mystacinus (Murciélago ratonero bigotudo), Myotis nattereri (Murciélago de Natterer), Nyctalus lasiopterus (Nóctulo grande), Nyctalus leisleri (Nóctulo pequeño), Nyctalus noctula (Nóctulo mediano), Oxyura leucocephala (Malvasía cabeciblanca), Pandion haliaetus (Águila pescadora), Phalacrocorax aristotelis (Cormorán moñudo), Phoenicurus phoenicurus (Colirrojo real), Pipistrellus kuhlii (Murciélago de borde claro), Pipistrellus nathusii (Murciélago de Nathusius), Pipistrellus pipistrellus (Murciélago enano), Pipistrellus pygmaeus (Murciélago de Cabrera), Plecotus auritus (Murciélago orejudo dorado), Plecotus austriacus (Murciélago orejudo gris), Pterocles alchata (Ganga común), Pterocles orientalis (Ganga ortega), Rana pyrenaica (Rana pirenaica), Rhinolophus euryale (Murciélago mediterráneo de herradura), Rhinolophus ferrumequinum (Murciélago grande de herradura), Rhinolophus hipposideros (Murciélago pequeño de herradura), Rhinolophus mehelyi (Murciélago mediano de herradura), Testudo graeca (Tortuga mora), Tetrax tetrax (Sisón común) |
|---|
Couverture temporelle
| Epoque de formation | 07/2012-01/2023 |
|---|
Données sur le projet
This thesis aims to enhance the efficiency of biodiversity data management to improve conservation efforts. It examines the dark data generated from environmental management-related activities, which often remain misused due to accessibility challenges. By identifying barriers to data flow, assessing data mobilization impacts on national biodiversity understanding, and developing improved data protocols, the project seeks to make critical biodiversity information more accessible and usable. The ultimate goal is to ensure that high-quality biodiversity data is available for informed decision-making and effective conservation planning, following FAIR data principles (Findable, Accessible, Interoperable, Reusable).
| Titre | DATA for BiodivERsity Governance: looking for the efficiency of biodiversity data management for conservation (DATABerG). |
|---|
Les personnes impliquées dans le projet:
Méthodes d'échantillonnage
We searched environmental Records of Decision (RODs) in the Official State Gazette (https://www.boe.es/) to identify pronouncements with biodiversity data. We processed these reports and automatically detected species citations. Those fieldwork-based records, so-called Primary Biodiversity Records, constitute this published data set.
| Etendue de l'étude | The data set contains species records from 232 Spanish localities or municipalities where environmental assessments have been conducted, in 90% of cases, locations suitable for installing a photovoltaic solar plant or a wind farm. Spain is a country located in southwestern Europe and includes most of the Iberian Peninsula, the Balearic Islands, the Canary Islands, and five small areas in North Africa. Due to its geographical position, its varied topography, and the influence of different climates, Spain is characterized by the presence of four biogeographical regions: Mediterranean bioregion, Atlantic bioregion, Alpine bioregion, and Macaronesian region. |
|---|---|
| Contrôle qualité | The performance of automatic biodiversity data detection was assessed by calculating precision and recall (Kohavi & Provost, 1998; Fahmy Amin, 2022) based on correctly detected, incorrectly detected, and undetected records. Precision, representing the accuracy of the detections, was 0.937, while recall, reflecting the proportion of total records detected, was 0.948. False positives, such as species names within organization titles, affected precision, while recall was compromised by misspelled or incomplete species names. Despite these issues, the detection system performed well overall. Georeferencing uncertainty was evaluated following Marcer et al. 2020. |
Description des étapes de la méthode:
- Environmental Records of Decision (RODs) were collected from the Official State Gazette by searching for “evaluación ambiental” in the “Other provisions” database. Using the Octoparse data scraper (Octoparse, n.d.), we extracted the content of these pronouncements as text strings for further analysis. Species citations were automatically detected using RStudio (R Core Team, 2022), considering scientific names, common names, and possible synonyms included in the CEEA and the LESRPE. These species records were manually reviewed and categorized into three types: Primary Biodiversity Record (PBR, based on fieldwork), absence (species not recorded despite fieldwork), and literature-based. PBRs were georeferenced a posteriori using Google Maps (https://www.google.com/maps), calculating their uncertainty following best practice guidelines (Chapman & Wieczorek, 2020; Marcer et al., 2020). The data were incorporated into the MZNA database (Zootron v4.5; Ariño, 1991) and were standardized following the Darwin Core Standard (Darwin Core Maintenance Group, 2023), resulting in a database with 32 fields.
Citations bibliographiques
- Kohavi, R. & Provost, F. (1998). Glossary of term. Machine Learning, 30: 271‑274. https://doi.org/10.1023/a:1017181826899. https://doi.org/10.1023/a:1017181826899
- Fahmy Amin, M. (2022). Confusion Matrix in Binary Classification Problems: A Step-by-Step Tutorial. Journal of Engineering Research, 6(5). https://doi.org/10.21608/erjeng.2022.274526. https://doi.org/10.21608/erjeng.2022.274526
- Marcer, A., Haston, E., Groom, Q., Ariño, A., Chapman, A., Bakken, T., Braun, P., Dillen, M., Ernst, M., Escobar, A., Fichtmüller, D., Livermore, L., Nicolson, N., Paragamian, K., Paul, D., Pettersson, L., Phillips, S., Plummer, J., Rainer, H., Rey, I., Robertson, T., Röpert, D., Santos, J., Uribe, F., Waller, J., Wieczorek, J. (2020). Quality issues in georeferencing: From physical collections to digital data repositories for ecological research. Diversity and distributions, 27(3): 564‑567. https://doi.org/10.1111/ddi.13208. https://doi.org/10.1111/ddi.13208
- Octoparse. (n.d.). Web scraping tool & free web crawlers. https://www.octoparse.com/. https://www.octoparse.com/
- R Core Team. (2022). R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna. URL: https://www.R-project.org. https://www.R-project.org
- Chapman, A. & Wieczorek, J. (2020). Georeferencing Best Practices. GBIF Secretariat, Copenhagen. https://doi.org/10.15468/doc-gg7h-s853. https://doi.org/10.15468/doc-gg7h-s853
- Ariño, A. H. (1991). Bibliography of Iberian Polychaetes: a data base. Ophelia, suppl. 5: 647–652. https://doi.org/10.1163/9789004629745_068. https://doi.org/10.1163/9789004629745_068
- Darwin Core Maintenance Group (2023) Darwin Core List of Terms. Biodiversity Information Standards (TDWG). http://rs.tdwg.org/dwc/doc/list/2023-09-18. http://rs.tdwg.org/dwc/doc/list/2023-09-18
Métadonnées additionnelles
| Objet | The aim of the present data set is to make the dark data generated during environmental assessments FAIR (Findable, Accessible, Interoperable, and Reusable). Publishing these data in a publicly accessible platform creates an opportunity for their potential reuse in future conservation decisions, ensuring that these decisions are based on the best available evidence. |
|---|---|
| Identifiants alternatifs | 10.15470/bvznpy |
| 3d6fbb6d-8699-4f93-9adc-c1fd6bc03f4e | |
| https://ipt.gbif.es/resource?r=mzna-lit |